BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033H05SP1|AL429816
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1602 1749 0.0
>3x_Contig1602
Length = 12694
Score = 1749 bits (878), Expect = 0.0
Identities = 894/904 (98%)
Strand = Plus / Minus
Query: 1 atctcaacttgtatggggggacattgtttcactctgacttctagaaagagggggagcctg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4572 atctcaacttgtatgaggggacattgtttcactctgacttctagaaagagggggagcctg 4513
Query: 61 aggtgtrgtgtcactctttgatttttcattagtagccaattttgatagcttttyatttww 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4512 aggtgtagtgtcactctttgatttttcattagtagccaattttgatagcttttcatttaa 4453
Query: 121 cttwtctwattcaatcgagttagctagttccctaggagaaacacttcttttcaaaattcc 180
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4452 cttatctaattcaatcgagttagctagttccctaggagaaacacttcttttcaaaattcc 4393
Query: 181 aacatggtctgagctatggttacgagacattgtcctggccaataagctgggatttgtccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4392 aacatggtctgagctatggttacgagacattgtcctggccaataagctgggatttgtccg 4333
Query: 241 atatggtggaagttgtctagctgggtgaacagatctagaggcacctgacatagttgtgga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4332 atatggtggaagttgtctagctgggtgaacagatctagaggcacctgacatatttgtgga 4273
Query: 301 ggaagagtacggtagattatgtggcaaccgattcgaagactgtcctccactgctggttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4272 ggaagagtacggtagattatgtggcaaccgattcgaagactgtcctccactgctggttgt 4213
Query: 361 tgtgaagctactgctatggctaacactcctggactttccgctggtggcagaggatggagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4212 tgtgaagctactgctatggctaacactcctggactttccgctggtggcagaggatggagc 4153
Query: 421 agtaggtatgattgagtatcttctttcttgatggactaaaccgacctctttaaccttagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4152 agtaggtatgattgagtatcttctttcttgatggactaaaccgacctctttaaccttagt 4093
Query: 481 tgtattcaagtcagtatgtggtaccttagaaaatgtgtctgtttcttcgttatattcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4092 tgtattcaagtcagtatgtggtaccttagaaaatgtgtctgtttcttcgttatattcata 4033
Query: 541 tagataccagcttacaccatatggtttgggctccaaacagtacacggaatgtagggggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4032 tagataccagcttacaccatatggtttgggctccaaacagtacacggaatgtagggggac 3973
Query: 601 atccaaatttgtaataacgtccttactcaagttcaaaaaataaccaagtaaaactcttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3972 atccaaatttgtaataacgtccttactcaagttcaaaaaataaccaagtaaaactcttgc 3913
Query: 661 taccactcgatgcgtgacgattagaagattatccgtaattctttctatttctgtaatcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3912 taccactcgatgcgtgacgattagaagattatccgtaattctttctatttctgtaatcac 3853
Query: 721 agggcgtaacctgttaataacatccatataagattcacctccaatgccaggatatctata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3852 agggcgtaacctgttaataacatccatataagattcacctccaatgccaggatatctata 3793
Query: 781 ccttaacttgtctagaagcctttcttcatattcttcaggagagcgtmgaaatatttcttc 840
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 3792 ccttaacttgtctagaagcctttcttcatattcttcaggagagcgtagcaatatttcttc 3733
Query: 841 gtatgtaagcccatcaaaatcacctgcacttaactcatctaacattttcatttgtttaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3732 gtatgtaagcccatcaaaatcacctgcacttaactcatctaacattttcatttgtttaat 3673
Query: 901 gtca 904
||||
Sbjct: 3672 gtca 3669
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5970
Number of Sequences: 1807
Number of extensions: 5970
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)